gmm.h

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#ifndef GMM_H
#define GMM_H
 
#include <itpp/base/mat.h>
#include <itpp/itexports.h>
 
 
namespace itpp
{

class ITPP_EXPORT GMM
{
public:
  GMM();
  GMM(int nomix, int dim);
  GMM(std::string filename);
  void init_from_vq(const vec &codebook, int dim);
  // void init(const vec &w_in, const vec &m_in, const vec &sigma_in);
  void init(const vec &w_in, const mat &m_in, const mat &sigma_in);
  void load(std::string filename);
  void save(std::string filename);
  void set_weight(const vec &weights, bool compflag = true);
  void set_weight(int i, double weight, bool compflag = true);
  void set_mean(const mat &m_in);
  void set_mean(const vec &means, bool compflag = true);
  void set_mean(int i, const vec &means, bool compflag = true);
  void set_covariance(const mat &sigma_in);
  void set_covariance(const vec &covariances, bool compflag = true);
  void set_covariance(int i, const vec &covariances, bool compflag = true);
  int get_no_mixtures();
  int get_no_gaussians() const { return M; }
  int get_dimension();
  vec get_weight();
  double get_weight(int i);
  vec get_mean();
  vec get_mean(int i);
  vec get_covariance();
  vec get_covariance(int i);
  void marginalize(int d_new);
  void join(const GMM &newgmm);
  void clear();
  double likelihood(const vec &x);
  double likelihood_aposteriori(const vec &x, int mixture);
  vec likelihood_aposteriori(const vec &x);
  vec draw_sample();
protected:
  vec   m, sigma, w;
  int   M, d;
private:
  void  compute_internals();
  vec   normweight, normexp;
};
 
inline void GMM::set_weight(const vec &weights, bool compflag) {w = weights; if (compflag) compute_internals(); }
inline void GMM::set_weight(int i, double weight, bool compflag) {w(i) = weight; if (compflag) compute_internals(); }
inline void GMM::set_mean(const vec &means, bool compflag) {m = means; if (compflag) compute_internals(); }
inline void GMM::set_covariance(const vec &covariances, bool compflag) {sigma = covariances; if (compflag) compute_internals(); }
inline int GMM::get_dimension() {return d;}
inline vec GMM::get_weight() {return w;}
inline double GMM::get_weight(int i) {return w(i);}
inline vec GMM::get_mean() {return m;}
inline vec GMM::get_mean(int i) {return m.mid(i*d, d);}
inline vec GMM::get_covariance() {return sigma;}
inline vec GMM::get_covariance(int i) {return sigma.mid(i*d, d);}
 
ITPP_EXPORT GMM gmmtrain(Array<vec> &TrainingData, int M, int NOITER = 30, bool VERBOSE = true);

 
} // namespace itpp
 
#endif // #ifndef GMM_H