ProteoWizard
Public Member Functions | Public Attributes | List of all members
pwiz::data::pepxml::SearchHit Struct Reference

#include <MinimumPepXML.hpp>

Public Member Functions

 SearchHit ()
 
void write (XMLWriter &writer) const
 
void read (std::istream &is)
 
bool operator== (const SearchHit &that) const
 
bool operator!= (const SearchHit &that) const
 

Public Attributes

int hitRank
 
std::string peptide
 
std::string peptidePrevAA
 
std::string peptideNextAA
 
std::string protein
 
std::string proteinDescr
 
int numTotalProteins
 
int numMatchedIons
 
int totalNumIons
 
double calcNeutralPepMass
 
double massDiff
 
int numTolTerm
 
int numMissedCleavages
 
int isRejected
 
AnalysisResult analysisResult
 
std::vector< AlternativeProteinalternativeProteins
 
ModificationInfo modificationInfo
 
std::vector< SearchScorePtrsearchScore
 

Detailed Description

Definition at line 327 of file MinimumPepXML.hpp.

Constructor & Destructor Documentation

◆ SearchHit()

pwiz::data::pepxml::SearchHit::SearchHit ( )
inline

Member Function Documentation

◆ write()

void pwiz::data::pepxml::SearchHit::write ( XMLWriter writer) const

Referenced by testSearchHit().

◆ read()

void pwiz::data::pepxml::SearchHit::read ( std::istream &  is)

Referenced by testSearchHit().

◆ operator==()

bool pwiz::data::pepxml::SearchHit::operator== ( const SearchHit that) const

◆ operator!=()

bool pwiz::data::pepxml::SearchHit::operator!= ( const SearchHit that) const

Member Data Documentation

◆ hitRank

int pwiz::data::pepxml::SearchHit::hitRank

Definition at line 331 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ peptide

std::string pwiz::data::pepxml::SearchHit::peptide

Definition at line 332 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ peptidePrevAA

std::string pwiz::data::pepxml::SearchHit::peptidePrevAA

Definition at line 333 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ peptideNextAA

std::string pwiz::data::pepxml::SearchHit::peptideNextAA

Definition at line 334 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ protein

std::string pwiz::data::pepxml::SearchHit::protein

Definition at line 335 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ proteinDescr

std::string pwiz::data::pepxml::SearchHit::proteinDescr

Definition at line 336 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ numTotalProteins

int pwiz::data::pepxml::SearchHit::numTotalProteins

Definition at line 337 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ numMatchedIons

int pwiz::data::pepxml::SearchHit::numMatchedIons

Definition at line 338 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ totalNumIons

int pwiz::data::pepxml::SearchHit::totalNumIons

Definition at line 339 of file MinimumPepXML.hpp.

◆ calcNeutralPepMass

double pwiz::data::pepxml::SearchHit::calcNeutralPepMass

Definition at line 340 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ massDiff

double pwiz::data::pepxml::SearchHit::massDiff

Definition at line 341 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ numTolTerm

int pwiz::data::pepxml::SearchHit::numTolTerm

Definition at line 342 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ numMissedCleavages

int pwiz::data::pepxml::SearchHit::numMissedCleavages

Definition at line 343 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ isRejected

int pwiz::data::pepxml::SearchHit::isRejected

Definition at line 344 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ analysisResult

AnalysisResult pwiz::data::pepxml::SearchHit::analysisResult

Definition at line 345 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ alternativeProteins

std::vector<AlternativeProtein> pwiz::data::pepxml::SearchHit::alternativeProteins

Definition at line 346 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ modificationInfo

ModificationInfo pwiz::data::pepxml::SearchHit::modificationInfo

Definition at line 347 of file MinimumPepXML.hpp.

Referenced by makeSearchHit().

◆ searchScore

std::vector<SearchScorePtr> pwiz::data::pepxml::SearchHit::searchScore

Definition at line 349 of file MinimumPepXML.hpp.


The documentation for this struct was generated from the following file:
pwiz::data::pepxml::SearchHit::numTolTerm
int numTolTerm
Definition: MinimumPepXML.hpp:342
pwiz::data::pepxml::SearchHit::isRejected
int isRejected
Definition: MinimumPepXML.hpp:344
pwiz::data::pepxml::SearchHit::hitRank
int hitRank
Definition: MinimumPepXML.hpp:331
pwiz::data::pepxml::SearchHit::massDiff
double massDiff
Definition: MinimumPepXML.hpp:341
pwiz::data::pepxml::SearchHit::numTotalProteins
int numTotalProteins
Definition: MinimumPepXML.hpp:337
pwiz::data::pepxml::SearchHit::totalNumIons
int totalNumIons
Definition: MinimumPepXML.hpp:339
pwiz::data::pepxml::SearchHit::numMatchedIons
int numMatchedIons
Definition: MinimumPepXML.hpp:338
pwiz::data::pepxml::SearchHit::calcNeutralPepMass
double calcNeutralPepMass
Definition: MinimumPepXML.hpp:340
pwiz::data::pepxml::SearchHit::numMissedCleavages
int numMissedCleavages
Definition: MinimumPepXML.hpp:343