Package picard.sam

Class CheckTerminatorBlock

java.lang.Object
picard.cmdline.CommandLineProgram
picard.sam.CheckTerminatorBlock

@DocumentedFeature public class CheckTerminatorBlock extends CommandLineProgram
Simple class to check the terminator block of a SAM file.
  • Field Details

    • INPUT

      @Argument(shortName="I", doc="The block compressed file to check.") public File INPUT
  • Constructor Details

    • CheckTerminatorBlock

      public CheckTerminatorBlock()
  • Method Details

    • doWork

      protected int doWork()
      Description copied from class: CommandLineProgram
      Do the work after command line has been parsed. RuntimeException may be thrown by this method, and are reported appropriately.
      Specified by:
      doWork in class CommandLineProgram
      Returns:
      program exit status.